Annotation Type Instance
API endpoint that allows AnnotationTypes to be viewed or edited.
» click to learn about Filtering, Ordering and more...
Accepted filters:
- id: ID (exact)
- created: Created (exact)
- modified: Modified (exact)
- name: Name starts with (istartswith)
- description: Description contains (icontains)
- query: Search filter on the name property (exact)
- owner: Owner Username (exact)
- owned_by: Filter on list of owned by group names [OR] (exact)
- public: Public (exact)
- type: Type (exact)
- label: Label (exact)
- created_by: Created by Username (exact)
- modified_by: Modified by Username (exact)
- model_name: [invalid name] (exact)
- model_type: [invalid name] (exact)
Advanced Filtering
You can also filter using a json object to process all search parameters. Currently this filter supports the syntax as produced/used by the http://summitroute.github.io/react-structured-filter/ search UI.
Example
?query_expression={"category":"name","operator":"contains","value":"Y00"},
{"category":"amount","operator":">","value":"10"},
{"category":"type__name","operator":"exact","value":"ANTIBODY"}
» more info about the query_expression param..
Preset mappings
- created_by: created_by__username
- modified_by: modified_by__username
- owner: owner__username
- owned_by: owned_by__name
- deleted: <function filter_deleted at 0x7f45063b6710>
- deleted_by: deleted_by__username
- notes: notes__content
- cv_category: cv_category__name
- field_meta: field_meta__name
- mandatory_owned_by: mandatory_owned_by__name
- user: user__username
- credential: credential__name
- workflowversion: workflowversion__name
- workflowrun: workflowrun__name
- dataset: dataset__name
Operators
- ==
- =
- >=
- >
- <=
- <
- contains
- icontains
- exact
- iexact
- startswith
- istartswith
- endswith
- iendswith
Permission filtering
Based on the current logged in user you can filter for objects that have a particular permission set:
- can_change: True/False, show objects that you can change
- can_delete: True/False, show objects that you can delete
# not applicable - will raise NotAcceptable:
- can_view: as this is always True, you can only view items you are allowed to see
Ordering
You can order on practically any field even spanning relations.
# reverse order on owner username
?ordering=-owner
# order on related field
?ordering=category__version
API endpoint that allows AnnotationTypes to be viewed or edited.
None
The default modelviewset used in this project
Add JSONPatch like functionality to bulk update items.
### Bulk Delete
This view also allows for one to bulk delete items. The url needs to be appended by ``/bulk_delete/`` and the ids
need to be given by multiple query_params:
```
{current_url}/bulk_delete/?id=<id_1>,id=<id_2>
```
GET /api/v2/annotationtypes/e5177f8e-8e3c-4978-af84-2aa88c0ddbfa/?format=api
{ "url": "https://labid-demo.embl.de/api/v2/annotationtypes/e5177f8e-8e3c-4978-af84-2aa88c0ddbfa/?format=api", "id": "e5177f8e-8e3c-4978-af84-2aa88c0ddbfa", "created_by": "admin", "modified_by": "admin", "created": { "name": "created", "value": "2025-12-16T09:11:47.794251+01:00", "category": "property" }, "modified": { "name": "modified", "value": "2025-12-16T09:11:47.794331+01:00", "category": "property" }, "name": "GeneticModification", "choice_label": "GeneticModification", "description": "MIAME Attribute. Note: use 'IndividualGeneticCharacteristics' to describe the genotype. The genetic modification introduced into the organism from which the biomaterial was derived. Examples of genetic modification include specification of a transgene or the gene knocked-out or details of transient transfection. Values could be one of chromosomal substitution, gene knock in, gene knock out, induced mutation, transfection or other if nothing suits your case.", "public": true, "permissions": { "public": true, "actions": { "view": { "users": [], "groups": [] }, "change": { "users": [], "groups": [] }, "delete": { "users": [], "groups": [] } } }, "unit_choices_api": null, "type": "VOCABULARYTERM", "label": "GeneticModification", "help_text": "MIAME Attribute. Note: use 'IndividualGeneticCharacteristics' to describe the genotype. The genetic modification introduced into the organism from which the biomaterial was derived. Examples of genetic modification include specification of a transgene or the gene knocked-out or details of transient transfection. Values could be one of chromosomal substitution, gene knock in, gene knock out, induced mutation, transfection or other if nothing suits your case.", "default": "", "has_default": false, "multiple": false, "is_protocol_parameter": false, "autocomplete": "", "searchable": true, "readonly": false, "sortable": true, "cv_category": "ac1d9e7c-cb17-42f4-85a7-adb64baaa7ef", "mandatory": false, "validations": [], "visibility": "ALWAYS", "edit_visibility": "ALWAYS", "list_visibility": "OPTIONAL", "value_choices": null, "choices_value": "id", "choices_label": "label", "choices_api": "https://labid-demo.embl.de/api/v2/vocabularies/terms/?category_id=ac1d9e7c-cb17-42f4-85a7-adb64baaa7ef&fields=id%2Clabel&ordering=name&page_size=20&response_format=flat", "preferred_view_widget": "CVVIEW", "preferred_edit_widget": "CVEDIT", "preferred_list_widget": "CSVTEXT", "field_meta": "ad0a3aab-0680-4e2b-b943-987013ba376b", "owner": "admin", "owned_by": "SYSTEM_GROUP" }