Term List
API endpoint that allows CV Terms to be viewed or edited.
» click to learn about Filtering, Ordering and more...
Accepted filters:
- search: Search in the following fields: ^name, ^description. (^startswith, $regex, =exact)
- id: ID (exact)
- created: Created (exact)
- modified: Modified (exact)
- name: Name starts with (istartswith)
- description: Description contains (icontains)
- query: Search filter on the name property (exact)
- owner: Owner Username (exact)
- owned_by: Filter on list of owned by group names [OR] (exact)
- public: Public (exact)
- deleted: Deleted (exact)
- deleted_by: Deleted by (exact)
- deleted_date: Deleted date (exact)
- default: Default (exact)
- category__name: Category Name (exact)
- category__id: Category ID (exact)
- created_by: Created by Username (exact)
- modified_by: Modified by Username (exact)
- dbxref_id: DBXRef ID (exact)
- category_name: Filter on category name (exact)
- category: Filter by category id (exact)
- category_id: Filter by category id (exact)
- category_id_list: Filter on list of category ids [OR] (exact)
- category_name_list: Filter on list of category names [OR] (exact)
» more..
- property: A property for which we need to retrieve the available terms, can be a name or uuid
- dependencies: a json dict that has the values for the properties the given property depends on:
{"chemical_risk_code": "R1", "<uuid>": "H1"}
- intersect: default False, Intersect on the given filter values instead of doing a "ANY" lookup
- scope(_id): (multiple) name or uuid of one or more Scopes.
- scope_tag(_id): (multiple) name or uuid of one or more Scope Tags.
Multiple scopes or scope tags are given like so: scope=Scope1&scope=Scope2
Advanced Filtering
You can also filter using a json object to process all search parameters. Currently this filter supports the syntax as produced/used by the http://summitroute.github.io/react-structured-filter/ search UI.
Example
?query_expression={"category":"name","operator":"contains","value":"Y00"},
{"category":"amount","operator":">","value":"10"},
{"category":"type__name","operator":"exact","value":"ANTIBODY"}
» more info about the query_expression param..
Preset mappings
- category: category__name
- deleted: <function filter_deleted at 0x7f45063b6710>
- deleted_by: deleted_by__username
- owner: owner__username
- owned_by: owned_by__name
- created_by: created_by__username
- modified_by: modified_by__username
Operators
- ==
- =
- >=
- >
- <=
- <
- contains
- icontains
- exact
- iexact
- startswith
- istartswith
- endswith
- iendswith
Permission filtering
Based on the current logged in user you can filter for objects that have a particular permission set:
- can_change: True/False, show objects that you can change
- can_delete: True/False, show objects that you can delete
# not applicable - will raise NotAcceptable:
- can_view: as this is always True, you can only view items you are allowed to see
Ordering
You can order on practically any field even spanning relations.
# reverse order on owner username
?ordering=-owner
# order on related field
?ordering=category__version
API endpoint that allows CV Terms to be viewed or edited.
<details>
<summary>
<i> » click to learn about Filtering, Ordering and more...</i>
</summary>
<details>
<summary> » more..</summary>
```
- property: A property for which we need to retrieve the available terms, can be a name or uuid
- dependencies: a json dict that has the values for the properties the given property depends on:
{"chemical_risk_code": "R1", "<uuid>": "H1"}
- intersect: default False, Intersect on the given filter values instead of doing a "ANY" lookup
- scope(_id): (multiple) name or uuid of one or more Scopes.
- scope_tag(_id): (multiple) name or uuid of one or more Scope Tags.
Multiple scopes or scope tags are given like so: scope=Scope1&scope=Scope2
```
</details>
</details>
None
The default modelviewset used in this project
Add JSONPatch like functionality to bulk update items.
### Bulk Delete
This view also allows for one to bulk delete items. The url needs to be appended by ``/bulk_delete/`` and the ids
need to be given by multiple query_params:
```
{current_url}/bulk_delete/?id=<id_1>,id=<id_2>
```
GET /api/v2/vocabularies/terms/?format=api&ordering=description&page=9
{ "previous": "https://labid-demo.embl.de/api/v2/vocabularies/terms/?format=api&ordering=description&page=8", "next": "https://labid-demo.embl.de/api/v2/vocabularies/terms/?format=api&ordering=description&page=10", "current": 9, "total": 1774, "total_pages": 89, "results": [ { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/27de7ebf-5119-47dc-94b2-d53374d6e5b4/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": "27de7ebf-5119-47dc-94b2-d53374d6e5b4" }, "created_by": { "name": "created_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "modified_by": { "name": "modified_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "created": { "name": "created", "value": "2025-12-16T09:11:47.019244+01:00", "category": "property" }, "modified": { "name": "modified", "value": "2025-12-16T09:11:47.019426+01:00", "category": "property" }, "model_name": { "name": "model_name", "category": "property", "value": "term" }, "app_name": { "name": "app_name", "category": "property", "value": "vocabularies" }, "model_type": { "name": "model_type", "category": "property", "value": "DEFAULT" }, "name": { "name": "name", "value": { "id": "27de7ebf-5119-47dc-94b2-d53374d6e5b4", "name": "none", "model_name": "term", "app_name": "vocabularies", "model_type": null }, "category": "property" }, "choice_label": { "name": "choice_label", "category": "property", "value": "none" }, "description": { "name": "description", "category": "property", "value": "" }, "label": { "name": "label", "category": "property", "value": "none" }, "short_name": { "name": "short_name", "category": "property", "value": "none" }, "image_url": { "name": "image_url", "category": "property", "value": "" }, "category": { "name": "category", "value": { "id": "ac1d9e7c-cb17-42f4-85a7-adb64baaa7ef", "name": "annotations_geneticmodification", "label": "Annotations: GeneticModification", "deleted": false, "model_name": "category", "app_name": "vocabularies", "model_type": "DEFAULT" }, "category": "property" }, "dbxref_id": { "name": "dbxref_id", "category": "property", "value": "" }, "default": { "name": "default", "category": "property", "value": false }, "permissions": { "name": "permissions", "value": { "public": true, "actions": {}, "allowed": [ "view" ] }, "category": "property" }, "public": { "name": "public", "value": true, "category": "property" }, "owner": { "name": "owner", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "owned_by": { "name": "owned_by", "value": { "id": 1, "name": "SYSTEM_GROUP" }, "category": "property" } }, { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/07fe6ad1-aaac-4d5c-a066-0aefd319ea0b/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": "07fe6ad1-aaac-4d5c-a066-0aefd319ea0b" }, "created_by": { "name": "created_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "modified_by": { "name": "modified_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "created": { "name": "created", "value": "2025-12-16T09:20:17.322306+01:00", "category": "property" }, "modified": { "name": "modified", "value": "2025-12-16T09:20:17.322362+01:00", "category": "property" }, "model_name": { "name": "model_name", "category": "property", "value": "term" }, "app_name": { "name": "app_name", "category": "property", "value": "vocabularies" }, "model_type": { "name": "model_type", "category": "property", "value": "DEFAULT" }, "name": { "name": "name", "value": { "id": "07fe6ad1-aaac-4d5c-a066-0aefd319ea0b", "name": "replicate design", "model_name": "term", "app_name": "vocabularies", "model_type": null }, "category": "property" }, "choice_label": { "name": "choice_label", "category": "property", "value": "replicate design" }, "description": { "name": "description", "category": "property", "value": "" }, "label": { "name": "label", "category": "property", "value": "replicate design" }, "short_name": { "name": "short_name", "category": "property", "value": "replicate design" }, "image_url": { "name": "image_url", "category": "property", "value": "" }, "category": { "name": "category", "value": { "id": "052787d8-4f7e-4816-a129-680dce02cc7e", "name": "efo_study_design", "label": "Efo_Study_Design", "deleted": false, "model_name": "category", "app_name": "vocabularies", "model_type": "DEFAULT" }, "category": "property" }, "dbxref_id": { "name": "dbxref_id", "category": "property", "value": "http://www.ebi.ac.uk/efo/EFO_0001776" }, "default": { "name": "default", "category": "property", "value": false }, "permissions": { "name": "permissions", "value": { "public": true, "actions": {}, "allowed": [ "view" ] }, "category": "property" }, "public": { "name": "public", "value": true, "category": "property" }, "owner": { "name": "owner", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "owned_by": { "name": "owned_by", "value": { "id": 1, "name": "SYSTEM_GROUP" }, "category": "property" } }, { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/52697d23-d99e-4d4d-a2ea-823b98ca7c27/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": "52697d23-d99e-4d4d-a2ea-823b98ca7c27" }, "created_by": { "name": "created_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "modified_by": { "name": "modified_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "created": { "name": "created", "value": "2025-12-16T09:11:47.195800+01:00", "category": "property" }, "modified": { "name": "modified", "value": "2025-12-16T09:11:47.195862+01:00", "category": "property" }, "model_name": { "name": "model_name", "category": "property", "value": "term" }, "app_name": { "name": "app_name", "category": "property", "value": "vocabularies" }, "model_type": { "name": "model_type", "category": "property", "value": "DEFAULT" }, "name": { "name": "name", "value": { "id": "52697d23-d99e-4d4d-a2ea-823b98ca7c27", "name": "frozen_sample", "model_name": "term", "app_name": "vocabularies", "model_type": null }, "category": "property" }, "choice_label": { "name": "choice_label", "category": "property", "value": "frozen_sample" }, "description": { "name": "description", "category": "property", "value": "" }, "label": { "name": "label", "category": "property", "value": "frozen_sample" }, "short_name": { "name": "short_name", "category": "property", "value": "frozen_sample" }, "image_url": { "name": "image_url", "category": "property", "value": "" }, "category": { "name": "category", "value": { "id": "608b5804-45c5-47b7-8e86-679ac6e9ce4b", "name": "annotations_sampletype", "label": "Annotations: SampleType", "deleted": false, "model_name": "category", "app_name": "vocabularies", "model_type": "DEFAULT" }, "category": "property" }, "dbxref_id": { "name": "dbxref_id", "category": "property", "value": "" }, "default": { "name": "default", "category": "property", "value": false }, "permissions": { "name": "permissions", "value": { "public": true, "actions": {}, "allowed": [ "view" ] }, "category": "property" }, "public": { "name": "public", "value": true, "category": "property" }, "owner": { "name": "owner", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "owned_by": { "name": "owned_by", "value": { "id": 1, "name": "SYSTEM_GROUP" }, "category": "property" } }, { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/e7d6b327-9d2b-4076-b517-8f0f1b104076/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": "e7d6b327-9d2b-4076-b517-8f0f1b104076" }, "created_by": { "name": "created_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "modified_by": { "name": "modified_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "created": { "name": "created", "value": "2025-12-16T09:20:17.291735+01:00", "category": "property" }, "modified": { "name": "modified", "value": "2025-12-16T09:20:17.291790+01:00", "category": "property" }, "model_name": { "name": "model_name", "category": "property", "value": "term" }, "app_name": { "name": "app_name", "category": "property", "value": "vocabularies" }, "model_type": { "name": "model_type", "category": "property", "value": "DEFAULT" }, "name": { "name": "name", "value": { "id": "e7d6b327-9d2b-4076-b517-8f0f1b104076", "name": "validation by real time PCR design", "model_name": "term", "app_name": "vocabularies", "model_type": null }, "category": "property" }, "choice_label": { "name": "choice_label", "category": "property", "value": "validation by real time PCR design" }, "description": { "name": "description", "category": "property", "value": "" }, "label": { "name": "label", "category": "property", "value": "validation by real time PCR design" }, "short_name": { "name": "short_name", "category": "property", "value": "validation by real time PCR design" }, "image_url": { "name": "image_url", "category": "property", "value": "" }, "category": { "name": "category", "value": { "id": "052787d8-4f7e-4816-a129-680dce02cc7e", "name": "efo_study_design", "label": "Efo_Study_Design", "deleted": false, "model_name": "category", "app_name": "vocabularies", "model_type": "DEFAULT" }, "category": "property" }, "dbxref_id": { "name": "dbxref_id", "category": "property", "value": "http://purl.obolibrary.org/obo/OBI_0001166" }, "default": { "name": "default", "category": "property", "value": false }, "permissions": { "name": "permissions", "value": { "public": true, "actions": {}, "allowed": [ "view" ] }, "category": "property" }, "public": { "name": "public", "value": true, "category": "property" }, "owner": { "name": "owner", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "owned_by": { "name": "owned_by", "value": { "id": 1, "name": "SYSTEM_GROUP" }, "category": "property" } }, { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/d1bd7d85-438e-45c3-84cc-a7124db6dc48/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": "d1bd7d85-438e-45c3-84cc-a7124db6dc48" }, "created_by": { "name": "created_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "modified_by": { "name": "modified_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "created": { "name": "created", "value": "2025-12-16T09:20:17.200486+01:00", "category": "property" }, "modified": { "name": "modified", "value": "2025-12-16T09:20:17.200573+01:00", "category": "property" }, "model_name": { "name": "model_name", "category": "property", "value": "term" }, "app_name": { "name": "app_name", "category": "property", "value": "vocabularies" }, "model_type": { "name": "model_type", "category": "property", "value": "DEFAULT" }, "name": { "name": "name", "value": { "id": "d1bd7d85-438e-45c3-84cc-a7124db6dc48", "name": "sex design", "model_name": "term", "app_name": "vocabularies", "model_type": null }, "category": "property" }, "choice_label": { "name": "choice_label", "category": "property", "value": "sex design" }, "description": { "name": "description", "category": "property", "value": "" }, "label": { "name": "label", "category": "property", "value": "sex design" }, "short_name": { "name": "short_name", "category": "property", "value": "sex design" }, "image_url": { "name": "image_url", "category": "property", "value": "" }, "category": { "name": "category", "value": { "id": "052787d8-4f7e-4816-a129-680dce02cc7e", "name": "efo_study_design", "label": "Efo_Study_Design", "deleted": false, "model_name": "category", "app_name": "vocabularies", "model_type": "DEFAULT" }, "category": "property" }, "dbxref_id": { "name": "dbxref_id", "category": "property", "value": "http://www.ebi.ac.uk/efo/EFO_0001752" }, "default": { "name": "default", "category": "property", "value": false }, "permissions": { "name": "permissions", "value": { "public": true, "actions": {}, "allowed": [ "view" ] }, "category": "property" }, "public": { "name": "public", "value": true, "category": "property" }, "owner": { "name": "owner", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "owned_by": { "name": "owned_by", "value": { "id": 1, "name": "SYSTEM_GROUP" }, "category": "property" } }, { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/11d083d9-ed7a-43dc-8ed1-d8015d330592/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": "11d083d9-ed7a-43dc-8ed1-d8015d330592" }, "created_by": { "name": "created_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "modified_by": { "name": "modified_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "created": { "name": "created", "value": "2025-12-16T09:20:17.203677+01:00", "category": "property" }, "modified": { "name": "modified", "value": "2025-12-16T09:20:17.203733+01:00", "category": "property" }, "model_name": { "name": "model_name", "category": "property", "value": "term" }, "app_name": { "name": "app_name", "category": "property", "value": "vocabularies" }, "model_type": { "name": "model_type", "category": "property", "value": "DEFAULT" }, "name": { "name": "name", "value": { "id": "11d083d9-ed7a-43dc-8ed1-d8015d330592", "name": "species design", "model_name": "term", "app_name": "vocabularies", "model_type": null }, "category": "property" }, "choice_label": { "name": "choice_label", "category": "property", "value": "species design" }, "description": { "name": "description", "category": "property", "value": "" }, "label": { "name": "label", "category": "property", "value": "species design" }, "short_name": { "name": "short_name", "category": "property", "value": "species design" }, "image_url": { "name": "image_url", "category": "property", "value": "" }, "category": { "name": "category", "value": { "id": "052787d8-4f7e-4816-a129-680dce02cc7e", "name": "efo_study_design", "label": "Efo_Study_Design", "deleted": false, "model_name": "category", "app_name": "vocabularies", "model_type": "DEFAULT" }, "category": "property" }, "dbxref_id": { "name": "dbxref_id", "category": "property", "value": "http://www.ebi.ac.uk/efo/EFO_0001753" }, "default": { "name": "default", "category": "property", "value": false }, "permissions": { "name": "permissions", "value": { "public": true, "actions": {}, "allowed": [ "view" ] }, "category": "property" }, "public": { "name": "public", "value": true, "category": "property" }, "owner": { "name": "owner", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "owned_by": { "name": "owned_by", "value": { "id": 1, "name": "SYSTEM_GROUP" }, "category": "property" } }, { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/b33453d3-c761-4cdb-8fd9-8b42689fb320/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": "b33453d3-c761-4cdb-8fd9-8b42689fb320" }, "created_by": { "name": "created_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "modified_by": { "name": "modified_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": 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