Term List
API endpoint that allows CV Terms to be viewed or edited.
» click to learn about Filtering, Ordering and more...
Accepted filters:
- search: Search in the following fields: ^name, ^description. (^startswith, $regex, =exact)
- id: ID (exact)
- created: Created (exact)
- modified: Modified (exact)
- name: Name starts with (istartswith)
- description: Description contains (icontains)
- query: Search filter on the name property (exact)
- owner: Owner Username (exact)
- owned_by: Filter on list of owned by group names [OR] (exact)
- public: Public (exact)
- deleted: Deleted (exact)
- deleted_by: Deleted by (exact)
- deleted_date: Deleted date (exact)
- default: Default (exact)
- category__name: Category Name (exact)
- category__id: Category ID (exact)
- created_by: Created by Username (exact)
- modified_by: Modified by Username (exact)
- dbxref_id: DBXRef ID (exact)
- category_name: Filter on category name (exact)
- category: Filter by category id (exact)
- category_id: Filter by category id (exact)
- category_id_list: Filter on list of category ids [OR] (exact)
- category_name_list: Filter on list of category names [OR] (exact)
» more..
- property: A property for which we need to retrieve the available terms, can be a name or uuid
- dependencies: a json dict that has the values for the properties the given property depends on:
{"chemical_risk_code": "R1", "<uuid>": "H1"}
- intersect: default False, Intersect on the given filter values instead of doing a "ANY" lookup
- scope(_id): (multiple) name or uuid of one or more Scopes.
- scope_tag(_id): (multiple) name or uuid of one or more Scope Tags.
Multiple scopes or scope tags are given like so: scope=Scope1&scope=Scope2
Advanced Filtering
You can also filter using a json object to process all search parameters. Currently this filter supports the syntax as produced/used by the http://summitroute.github.io/react-structured-filter/ search UI.
Example
?query_expression={"category":"name","operator":"contains","value":"Y00"},
{"category":"amount","operator":">","value":"10"},
{"category":"type__name","operator":"exact","value":"ANTIBODY"}
» more info about the query_expression param..
Preset mappings
- category: category__name
- deleted: <function filter_deleted at 0x7f0bca588c10>
- deleted_by: deleted_by__username
- owner: owner__username
- owned_by: owned_by__name
- created_by: created_by__username
- modified_by: modified_by__username
Operators
- ==
- =
- >=
- >
- <=
- <
- contains
- icontains
- exact
- iexact
- startswith
- istartswith
- endswith
- iendswith
Permission filtering
Based on the current logged in user you can filter for objects that have a particular permission set:
- can_change: True/False, show objects that you can change
- can_delete: True/False, show objects that you can delete
# not applicable - will raise NotAcceptable:
- can_view: as this is always True, you can only view items you are allowed to see
Ordering
You can order on practically any field even spanning relations.
# reverse order on owner username
?ordering=-owner
# order on related field
?ordering=category__version
API endpoint that allows CV Terms to be viewed or edited.
<details>
<summary>
<i> » click to learn about Filtering, Ordering and more...</i>
</summary>
<details>
<summary> » more..</summary>
```
- property: A property for which we need to retrieve the available terms, can be a name or uuid
- dependencies: a json dict that has the values for the properties the given property depends on:
{"chemical_risk_code": "R1", "<uuid>": "H1"}
- intersect: default False, Intersect on the given filter values instead of doing a "ANY" lookup
- scope(_id): (multiple) name or uuid of one or more Scopes.
- scope_tag(_id): (multiple) name or uuid of one or more Scope Tags.
Multiple scopes or scope tags are given like so: scope=Scope1&scope=Scope2
```
</details>
</details>
None
The default modelviewset used in this project
Add JSONPatch like functionality to bulk update items.
### Bulk Delete
This view also allows for one to bulk delete items. The url needs to be appended by ``/bulk_delete/`` and the ids
need to be given by multiple query_params:
```
{current_url}/bulk_delete/?id=<id_1>,id=<id_2>
```
GET /api/v2/vocabularies/terms/?format=api&ordering=dbxref_id&page=4
{ "previous": "https://labid-demo.embl.de/api/v2/vocabularies/terms/?format=api&ordering=dbxref_id&page=3", "next": "https://labid-demo.embl.de/api/v2/vocabularies/terms/?format=api&ordering=dbxref_id&page=5", "current": 4, "total": 1774, "total_pages": 89, "results": [ { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/47bf8af6-0916-4b18-86a9-488834e08c8a/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": "47bf8af6-0916-4b18-86a9-488834e08c8a" }, "created_by": { "name": "created_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "modified_by": { "name": "modified_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "created": { "name": "created", "value": "2025-12-08T16:12:43.626972+01:00", "category": "property" }, "modified": { "name": "modified", "value": "2025-12-08T16:12:43.627027+01:00", "category": "property" }, "model_name": { "name": "model_name", "category": "property", "value": "term" }, "app_name": { "name": "app_name", "category": "property", "value": "vocabularies" }, "model_type": { "name": "model_type", "category": "property", "value": "DEFAULT" }, "name": { "name": "name", "value": { "id": "47bf8af6-0916-4b18-86a9-488834e08c8a", "name": "coitus", "model_name": "term", "app_name": "vocabularies", "model_type": null }, "category": "property" }, "choice_label": { "name": "choice_label", "category": "property", "value": "coitus" }, "description": { "name": "description", "category": "property", "value": "" }, "label": { "name": "label", "category": "property", "value": "coitus" }, "short_name": { "name": "short_name", "category": "property", "value": "coitus" }, "image_url": { "name": "image_url", "category": "property", "value": "" }, "category": { "name": "category", "value": { "id": "c61efa79-0016-4088-b8fc-5931f2f6bffc", "name": "annotations_initialtimepoint", "label": "Annotations: InitialTimepoint", "deleted": false, "model_name": "category", "app_name": "vocabularies", "model_type": "DEFAULT" }, "category": "property" }, "dbxref_id": { "name": "dbxref_id", "category": "property", "value": "" }, "default": { "name": "default", "category": "property", "value": false }, "permissions": { "name": "permissions", "value": { "public": true, "actions": {}, "allowed": [ "view" ] }, "category": "property" }, "public": { "name": "public", "value": true, "category": "property" }, "owner": { "name": "owner", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "owned_by": { "name": "owned_by", "value": { "id": 1, "name": "SYSTEM_GROUP" }, "category": "property" } }, { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/22f2d54e-ed42-4c63-a8d1-fa6ebdf003a7/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": "22f2d54e-ed42-4c63-a8d1-fa6ebdf003a7" }, "created_by": { "name": "created_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "modified_by": { "name": "modified_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "created": { "name": "created", "value": "2025-12-08T16:13:15.935424+01:00", "category": "property" }, "modified": { "name": "modified", "value": "2025-12-08T16:13:15.935480+01:00", "category": "property" }, "model_name": { "name": "model_name", "category": "property", "value": "term" }, "app_name": { "name": "app_name", "category": "property", "value": "vocabularies" }, "model_type": { "name": "model_type", "category": "property", "value": "DEFAULT" }, "name": { "name": "name", "value": { "id": "22f2d54e-ed42-4c63-a8d1-fa6ebdf003a7", "name": "R1", "model_name": "term", "app_name": "vocabularies", "model_type": null }, "category": "property" }, "choice_label": { "name": "choice_label", "category": "property", "value": "R1" }, "description": { "name": "description", "category": "property", "value": "Explosive when dry" }, "label": { "name": "label", "category": "property", "value": "R1 (Explosive when dry)" }, "short_name": { "name": "short_name", "category": "property", "value": "R1" }, "image_url": { "name": "image_url", "category": "property", "value": "" }, "category": { "name": "category", "value": { "id": "dc8d7ef6-3bef-4f9c-9f87-f1afd530896f", "name": "chemical_risk_codes", "label": "Risk Phrases (R-Phrases)", "deleted": false, "model_name": "category", "app_name": "vocabularies", "model_type": "DEFAULT" }, "category": "property" }, "dbxref_id": { "name": "dbxref_id", "category": "property", "value": "" }, "default": { "name": "default", "category": "property", "value": false }, "permissions": { "name": "permissions", "value": { "public": true, "actions": {}, "allowed": [ "view" ] }, "category": "property" }, "public": { "name": "public", "value": true, "category": "property" }, "owner": { "name": "owner", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "owned_by": { "name": "owned_by", "value": { "id": 1, "name": "SYSTEM_GROUP" }, "category": "property" } }, { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/bbca206b-0946-406f-b655-cc70d4c013f8/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": "bbca206b-0946-406f-b655-cc70d4c013f8" }, "created_by": { "name": "created_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "modified_by": { "name": "modified_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "created": { "name": "created", "value": "2025-12-08T16:12:43.629599+01:00", "category": "property" }, "modified": { "name": "modified", "value": "2025-12-08T16:12:43.629662+01:00", "category": "property" }, "model_name": { "name": "model_name", "category": "property", "value": "term" }, "app_name": { "name": "app_name", "category": "property", "value": "vocabularies" }, "model_type": { "name": "model_type", "category": "property", "value": "DEFAULT" }, "name": { "name": "name", "value": { "id": "bbca206b-0946-406f-b655-cc70d4c013f8", "name": "birth", "model_name": "term", "app_name": "vocabularies", "model_type": null }, "category": "property" }, "choice_label": { "name": "choice_label", "category": "property", "value": "birth" }, "description": { "name": "description", "category": "property", "value": "" }, "label": { "name": "label", "category": "property", "value": "birth" }, "short_name": { "name": "short_name", "category": "property", "value": "birth" }, "image_url": { "name": "image_url", "category": "property", "value": "" }, "category": { "name": "category", "value": { "id": "c61efa79-0016-4088-b8fc-5931f2f6bffc", "name": "annotations_initialtimepoint", "label": "Annotations: InitialTimepoint", "deleted": false, "model_name": "category", "app_name": "vocabularies", "model_type": "DEFAULT" }, "category": "property" }, "dbxref_id": { "name": "dbxref_id", "category": "property", "value": "" }, "default": { "name": "default", "category": "property", "value": false }, "permissions": { "name": "permissions", "value": { "public": true, "actions": {}, "allowed": [ "view" ] }, "category": "property" }, "public": { "name": "public", "value": true, "category": "property" }, "owner": { "name": "owner", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "owned_by": { "name": "owned_by", "value": { "id": 1, "name": "SYSTEM_GROUP" }, "category": "property" } }, { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/9dd3498d-3e23-442e-94e7-d247476bbb18/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": "9dd3498d-3e23-442e-94e7-d247476bbb18" }, "created_by": { "name": "created_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "modified_by": { "name": "modified_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "created": { "name": "created", "value": "2025-12-08T16:12:43.529015+01:00", "category": "property" }, "modified": { "name": "modified", "value": "2025-12-08T16:12:43.529147+01:00", "category": "property" }, "model_name": { "name": "model_name", "category": "property", "value": "term" }, "app_name": { "name": "app_name", "category": "property", "value": "vocabularies" }, "model_type": { "name": "model_type", "category": "property", "value": "DEFAULT" }, "name": { "name": "name", "value": { "id": "9dd3498d-3e23-442e-94e7-d247476bbb18", "name": "induced mutation", "model_name": "term", "app_name": "vocabularies", "model_type": null }, "category": "property" }, "choice_label": { "name": "choice_label", "category": "property", "value": "induced mutation" }, "description": { "name": "description", "category": "property", "value": "" }, "label": { "name": "label", "category": "property", "value": "induced mutation" }, "short_name": { "name": "short_name", "category": "property", "value": "induced mutation" }, "image_url": { "name": "image_url", "category": "property", "value": "" }, "category": { "name": "category", "value": { "id": "ae3d53e3-0a6d-4e25-9cbb-b13f215f36ea", "name": "annotations_geneticmodification", "label": "Annotations: GeneticModification", "deleted": false, "model_name": "category", "app_name": "vocabularies", "model_type": "DEFAULT" }, "category": "property" }, "dbxref_id": { "name": "dbxref_id", "category": "property", "value": "" }, "default": { "name": "default", "category": "property", "value": false }, "permissions": { "name": "permissions", "value": { "public": true, "actions": {}, "allowed": [ "view" ] }, "category": "property" }, "public": { "name": "public", "value": true, "category": "property" }, "owner": { "name": "owner", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "owned_by": { "name": "owned_by", "value": { "id": 1, "name": "SYSTEM_GROUP" }, "category": "property" } }, { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/118c10ff-1431-4ffd-b78d-07e280e13d5b/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": "118c10ff-1431-4ffd-b78d-07e280e13d5b" }, "created_by": { "name": "created_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "modified_by": { "name": "modified_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "created": { "name": "created", "value": "2025-12-08T16:12:43.686857+01:00", "category": "property" }, "modified": { "name": "modified", "value": "2025-12-08T16:12:43.686913+01:00", "category": "property" }, "model_name": { "name": "model_name", "category": "property", "value": "term" }, "app_name": { "name": "app_name", "category": "property", "value": "vocabularies" }, "model_type": { "name": "model_type", "category": "property", "value": "DEFAULT" }, "name": { "name": "name", "value": { "id": "118c10ff-1431-4ffd-b78d-07e280e13d5b", "name": "freeze_dried_sample", "model_name": "term", "app_name": "vocabularies", "model_type": null }, "category": "property" }, "choice_label": { "name": "choice_label", "category": "property", "value": "freeze_dried_sample" }, "description": { "name": "description", "category": "property", "value": "" }, "label": { "name": "label", "category": "property", "value": "freeze_dried_sample" }, "short_name": { "name": "short_name", "category": "property", "value": "freeze_dried_sample" }, "image_url": { "name": "image_url", "category": "property", "value": "" }, "category": { "name": "category", "value": { "id": "5641bc19-21fb-49c7-abb8-b960f6e44291", "name": "annotations_sampletype", "label": "Annotations: SampleType", "deleted": false, "model_name": "category", "app_name": "vocabularies", "model_type": "DEFAULT" }, "category": "property" }, "dbxref_id": { "name": "dbxref_id", "category": "property", "value": "" }, "default": { "name": "default", "category": "property", "value": false }, "permissions": { "name": "permissions", "value": { "public": true, "actions": {}, "allowed": [ "view" ] }, "category": "property" }, "public": { "name": "public", "value": true, "category": "property" }, "owner": { "name": "owner", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "owned_by": { "name": "owned_by", "value": { "id": 1, "name": "SYSTEM_GROUP" }, "category": "property" } }, { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/24777295-bb05-497d-a908-26cff1683ead/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": "24777295-bb05-497d-a908-26cff1683ead" }, "created_by": { "name": "created_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "modified_by": { "name": "modified_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "created": { "name": "created", "value": "2025-12-08T16:12:43.445514+01:00", "category": "property" }, "modified": { "name": "modified", "value": "2025-12-08T16:12:43.445568+01:00", "category": "property" }, "model_name": { "name": "model_name", "category": "property", "value": "term" }, "app_name": { "name": "app_name", "category": "property", "value": "vocabularies" }, "model_type": { "name": "model_type", "category": "property", "value": "DEFAULT" }, "name": { "name": "name", "value": { "id": "24777295-bb05-497d-a908-26cff1683ead", "name": "serum", "model_name": "term", "app_name": "vocabularies", "model_type": null }, "category": "property" }, "choice_label": { "name": "choice_label", "category": "property", "value": "serum" }, "description": { "name": "description", "category": "property", "value": "Serume" }, "label": { "name": "label", "category": "property", "value": "serum (Serume)" }, "short_name": { "name": "short_name", "category": "property", "value": "serum" }, "image_url": { "name": "image_url", "category": "property", "value": "" }, "category": { "name": "category", "value": { "id": "2dccf125-3de7-4b5f-b22c-b2e70a5c6cda", "name": "annotations_antibodytype", "label": "Annotations: AntibodyType", "deleted": false, "model_name": "category", "app_name": "vocabularies", "model_type": "DEFAULT" }, "category": "property" }, "dbxref_id": { "name": "dbxref_id", "category": "property", "value": "" }, "default": { "name": "default", "category": "property", "value": false }, "permissions": { "name": "permissions", "value": { "public": true, "actions": {}, "allowed": [ "view" ] }, "category": "property" }, "public": { "name": "public", "value": true, "category": "property" }, "owner": { "name": "owner", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "owned_by": { "name": "owned_by", "value": { "id": 1, "name": "SYSTEM_GROUP" }, "category": "property" } }, { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/18a34515-81af-495a-9e51-523ce1e33d96/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": "18a34515-81af-495a-9e51-523ce1e33d96" }, "created_by": { "name": "created_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "modified_by": { "name": "modified_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "created": { "name": "created", "value": "2025-12-08T16:12:43.689541+01:00", "category": "property" }, "modified": { "name": "modified", "value": 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"name": "annotations_sampletype", "label": "Annotations: SampleType", "deleted": false, "model_name": "category", "app_name": "vocabularies", "model_type": "DEFAULT" }, "category": "property" }, "dbxref_id": { "name": "dbxref_id", "category": "property", "value": "" }, "default": { "name": "default", "category": "property", "value": false }, "permissions": { "name": "permissions", "value": { "public": true, "actions": {}, "allowed": [ "view" ] }, "category": "property" }, "public": { "name": "public", "value": true, "category": "property" }, "owner": { "name": "owner", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "owned_by": { "name": "owned_by", "value": { "id": 1, "name": "SYSTEM_GROUP" }, "category": "property" } }, { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/64e28261-3cab-4dc1-9922-c1711a2272c4/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": 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