Term List
API endpoint that allows CV Terms to be viewed or edited.
» click to learn about Filtering, Ordering and more...
Accepted filters:
- search: Search in the following fields: ^name, ^description. (^startswith, $regex, =exact)
- id: ID (exact)
- created: Created (exact)
- modified: Modified (exact)
- name: Name starts with (istartswith)
- description: Description contains (icontains)
- query: Search filter on the name property (exact)
- owner: Owner Username (exact)
- owned_by: Filter on list of owned by group names [OR] (exact)
- public: Public (exact)
- deleted: Deleted (exact)
- deleted_by: Deleted by (exact)
- deleted_date: Deleted date (exact)
- default: Default (exact)
- category__name: Category Name (exact)
- category__id: Category ID (exact)
- created_by: Created by Username (exact)
- modified_by: Modified by Username (exact)
- dbxref_id: DBXRef ID (exact)
- category_name: Filter on category name (exact)
- category: Filter by category id (exact)
- category_id: Filter by category id (exact)
- category_id_list: Filter on list of category ids [OR] (exact)
- category_name_list: Filter on list of category names [OR] (exact)
» more..
- property: A property for which we need to retrieve the available terms, can be a name or uuid
- dependencies: a json dict that has the values for the properties the given property depends on:
{"chemical_risk_code": "R1", "<uuid>": "H1"}
- intersect: default False, Intersect on the given filter values instead of doing a "ANY" lookup
- scope(_id): (multiple) name or uuid of one or more Scopes.
- scope_tag(_id): (multiple) name or uuid of one or more Scope Tags.
Multiple scopes or scope tags are given like so: scope=Scope1&scope=Scope2
Advanced Filtering
You can also filter using a json object to process all search parameters. Currently this filter supports the syntax as produced/used by the http://summitroute.github.io/react-structured-filter/ search UI.
Example
?query_expression={"category":"name","operator":"contains","value":"Y00"},
{"category":"amount","operator":">","value":"10"},
{"category":"type__name","operator":"exact","value":"ANTIBODY"}
» more info about the query_expression param..
Preset mappings
- category: category__name
- deleted: <function filter_deleted at 0x7f45063765f0>
- deleted_by: deleted_by__username
- owner: owner__username
- owned_by: owned_by__name
- created_by: created_by__username
- modified_by: modified_by__username
Operators
- ==
- =
- >=
- >
- <=
- <
- contains
- icontains
- exact
- iexact
- startswith
- istartswith
- endswith
- iendswith
Permission filtering
Based on the current logged in user you can filter for objects that have a particular permission set:
- can_change: True/False, show objects that you can change
- can_delete: True/False, show objects that you can delete
# not applicable - will raise NotAcceptable:
- can_view: as this is always True, you can only view items you are allowed to see
Ordering
You can order on practically any field even spanning relations.
# reverse order on owner username
?ordering=-owner
# order on related field
?ordering=category__version
API endpoint that allows CV Terms to be viewed or edited.
<details>
<summary>
<i> » click to learn about Filtering, Ordering and more...</i>
</summary>
<details>
<summary> » more..</summary>
```
- property: A property for which we need to retrieve the available terms, can be a name or uuid
- dependencies: a json dict that has the values for the properties the given property depends on:
{"chemical_risk_code": "R1", "<uuid>": "H1"}
- intersect: default False, Intersect on the given filter values instead of doing a "ANY" lookup
- scope(_id): (multiple) name or uuid of one or more Scopes.
- scope_tag(_id): (multiple) name or uuid of one or more Scope Tags.
Multiple scopes or scope tags are given like so: scope=Scope1&scope=Scope2
```
</details>
</details>
None
The default modelviewset used in this project
Add JSONPatch like functionality to bulk update items.
### Bulk Delete
This view also allows for one to bulk delete items. The url needs to be appended by ``/bulk_delete/`` and the ids
need to be given by multiple query_params:
```
{current_url}/bulk_delete/?id=<id_1>,id=<id_2>
```
GET /api/v2/vocabularies/terms/?format=api&ordering=-id&page=88
{ "previous": "https://labid-demo.embl.de/api/v2/vocabularies/terms/?format=api&ordering=-id&page=87", "next": "https://labid-demo.embl.de/api/v2/vocabularies/terms/?format=api&ordering=-id&page=89", "current": 88, "total": 1774, "total_pages": 89, "results": [ { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/0389f09c-2aa7-48cf-8d6d-eebf1f9ea6c3/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": "0389f09c-2aa7-48cf-8d6d-eebf1f9ea6c3" }, "created_by": { "name": "created_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "modified_by": { "name": "modified_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "created": { "name": "created", "value": "2025-12-16T09:29:04.600813+01:00", "category": "property" }, "modified": { "name": "modified", "value": "2025-12-16T09:29:04.600868+01:00", "category": "property" }, "model_name": { "name": "model_name", "category": "property", "value": "term" }, "app_name": { "name": "app_name", "category": "property", "value": "vocabularies" }, "model_type": { "name": "model_type", "category": "property", "value": "DEFAULT" }, "name": { "name": "name", "value": { "id": "0389f09c-2aa7-48cf-8d6d-eebf1f9ea6c3", "name": "CrystalStacker", "model_name": "term", "app_name": "vocabularies", "model_type": null }, "category": "property" }, "choice_label": { "name": "choice_label", "category": "property", "value": "CrystalStacker" }, "description": { "name": "description", "category": "property", "value": "CrystalStacker License" }, "label": { "name": "label", "category": "property", "value": "CrystalStacker (CrystalStacker License)" }, "short_name": { "name": "short_name", "category": "property", "value": "CrystalStacker" }, "image_url": { "name": "image_url", "category": "property", "value": "" }, "category": { "name": "category", "value": { "id": "7b66b3c2-7068-4041-9a05-fa247729d77c", "name": "spdx_licences", "label": "SPDX Licenses", "deleted": false, "model_name": "category", "app_name": "vocabularies", "model_type": "DEFAULT" }, "category": "property" }, "dbxref_id": { "name": "dbxref_id", "category": "property", "value": "CrystalStacker" }, "default": { "name": "default", "category": "property", "value": false }, "permissions": { "name": "permissions", "value": { "public": true, "actions": {}, "allowed": [ "view" ] }, "category": "property" }, "public": { "name": "public", "value": true, "category": "property" }, "owner": { "name": "owner", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "owned_by": { "name": "owned_by", "value": { "id": 1, "name": "SYSTEM_GROUP" }, "category": "property" } }, { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/03784a17-b915-4d27-bbb4-f6831b2296c1/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": "03784a17-b915-4d27-bbb4-f6831b2296c1" }, "created_by": { "name": "created_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "modified_by": { "name": "modified_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "created": { "name": "created", "value": "2025-12-16T09:11:47.221560+01:00", "category": "property" }, "modified": { "name": "modified", "value": "2025-12-16T09:11:47.221623+01:00", "category": "property" }, "model_name": { "name": "model_name", "category": "property", "value": "term" }, "app_name": { "name": "app_name", "category": "property", "value": "vocabularies" }, "model_type": { "name": "model_type", "category": "property", "value": "DEFAULT" }, "name": { "name": "name", "value": { "id": "03784a17-b915-4d27-bbb4-f6831b2296c1", "name": "mating type alpha", "model_name": "term", "app_name": "vocabularies", "model_type": null }, "category": "property" }, "choice_label": { "name": "choice_label", "category": "property", "value": "mating type alpha" }, "description": { "name": "description", "category": "property", "value": "" }, "label": { "name": "label", "category": "property", "value": "mating type alpha" }, "short_name": { "name": "short_name", "category": "property", "value": "mating type alpha" }, "image_url": { "name": "image_url", "category": "property", "value": "" }, "category": { "name": "category", "value": { "id": "f2d9452b-1443-4b12-8512-0cb0ad06991c", "name": "annotations_sex", "label": "Annotations: Sex", "deleted": false, "model_name": "category", "app_name": "vocabularies", "model_type": "DEFAULT" }, "category": "property" }, "dbxref_id": { "name": "dbxref_id", "category": "property", "value": "" }, "default": { "name": "default", "category": "property", "value": false }, "permissions": { "name": "permissions", "value": { "public": true, "actions": {}, "allowed": [ "view" ] }, "category": "property" }, "public": { "name": "public", "value": true, "category": "property" }, "owner": { "name": "owner", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "owned_by": { "name": "owned_by", "value": { "id": 1, "name": "SYSTEM_GROUP" }, "category": "property" } }, { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/03280cfd-a9bf-4c4b-bacc-7cd2e2a4da9f/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": "03280cfd-a9bf-4c4b-bacc-7cd2e2a4da9f" }, "created_by": { "name": "created_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "modified_by": { "name": "modified_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "created": { "name": "created", "value": "2025-12-16T09:24:50.039038+01:00", "category": "property" }, "modified": { "name": "modified", "value": "2025-12-16T09:24:50.039120+01:00", "category": "property" }, "model_name": { "name": "model_name", "category": "property", "value": "term" }, "app_name": { "name": "app_name", "category": "property", "value": "vocabularies" }, "model_type": { "name": "model_type", "category": "property", "value": "DEFAULT" }, "name": { "name": "name", "value": { "id": "03280cfd-a9bf-4c4b-bacc-7cd2e2a4da9f", "name": "/static/stocks/images/GHS-pictogram-explos_ghs01.png?name=Explosive", "model_name": "term", "app_name": "vocabularies", "model_type": null }, "category": "property" }, "choice_label": { "name": "choice_label", "category": "property", "value": "/static/stocks/images/GHS-pictogram-explos_ghs01.png?name=Explosive" }, "description": { "name": "description", "category": "property", "value": "Unstable explosives, ..." }, "label": { "name": "label", "category": "property", "value": "Explosive (Unstable explosives, ...)" }, "short_name": { "name": "short_name", "category": "property", "value": "Explosive" }, "image_url": { "name": "image_url", "category": "property", "value": "https://labid-demo.embl.de/static/stocks/images/GHS-pictogram-explos_ghs01.png?name=Explosive" }, "category": { "name": "category", "value": { "id": "02063c34-7950-428f-b8e6-75a664f628a0", "name": "chemical_toxicity_pictograms", "label": "Chemical_Toxicity_Pictograms", "deleted": false, "model_name": "category", "app_name": "vocabularies", "model_type": "DEFAULT" }, "category": "property" }, "dbxref_id": { "name": "dbxref_id", "category": "property", "value": "GHS01" }, "default": { "name": "default", "category": "property", "value": false }, "permissions": { "name": "permissions", "value": { "public": true, "actions": {}, "allowed": [ "view" ] }, "category": "property" }, "public": { "name": "public", "value": true, "category": "property" }, "owner": { "name": "owner", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "owned_by": { "name": "owned_by", "value": { "id": 1, "name": "SYSTEM_GROUP" }, "category": "property" } }, { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/031e382e-3dc1-4328-977c-4948ab8829df/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": "031e382e-3dc1-4328-977c-4948ab8829df" }, "created_by": { "name": "created_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "modified_by": { "name": "modified_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "created": { "name": "created", "value": "2025-12-16T09:22:26.833907+01:00", "category": "property" }, "modified": { "name": "modified", "value": "2025-12-16T09:22:26.833964+01:00", "category": "property" }, "model_name": { "name": "model_name", "category": "property", "value": "term" }, "app_name": { "name": "app_name", "category": "property", "value": "vocabularies" }, "model_type": { "name": "model_type", "category": "property", "value": "DEFAULT" }, "name": { "name": "name", "value": { "id": "031e382e-3dc1-4328-977c-4948ab8829df", "name": "Inverse rRNA", "model_name": "term", "app_name": "vocabularies", "model_type": null }, "category": "property" }, "choice_label": { "name": "choice_label", "category": "property", "value": "Inverse rRNA" }, "description": { "name": "description", "category": "property", "value": "" }, "label": { "name": "label", "category": "property", "value": "Inverse rRNA" }, "short_name": { "name": "short_name", "category": "property", "value": "Inverse rRNA" }, "image_url": { "name": "image_url", "category": "property", "value": "" }, "category": { "name": "category", "value": { "id": "01a17a22-1a4a-4f0c-9f73-7bd778dab504", "name": "sample_library_selection", "label": "Sample_Library_Selection", "deleted": false, "model_name": "category", "app_name": "vocabularies", "model_type": "DEFAULT" }, "category": "property" }, "dbxref_id": { "name": "dbxref_id", "category": "property", "value": "Inverse rRNA" }, "default": { "name": "default", "category": "property", "value": false }, "permissions": { "name": "permissions", "value": { "public": true, "actions": {}, "allowed": [ "view" ] }, "category": "property" }, "public": { "name": "public", "value": true, "category": "property" }, "owner": { "name": "owner", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "owned_by": { "name": "owned_by", "value": { "id": 1, "name": "SYSTEM_GROUP" }, "category": "property" } }, { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/031624bc-2cc3-4705-abf9-c0a8fed75dda/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": "031624bc-2cc3-4705-abf9-c0a8fed75dda" }, "created_by": { "name": "created_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "modified_by": { "name": "modified_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "created": { "name": "created", "value": "2025-12-16T09:23:19.640709+01:00", "category": "property" }, "modified": { "name": "modified", "value": "2025-12-16T09:23:19.640790+01:00", "category": "property" }, "model_name": { "name": "model_name", "category": "property", "value": "term" }, "app_name": { "name": "app_name", "category": "property", "value": "vocabularies" }, "model_type": { "name": "model_type", "category": "property", "value": "DEFAULT" }, "name": { "name": "name", "value": { "id": "031624bc-2cc3-4705-abf9-c0a8fed75dda", "name": "22G", "model_name": "term", "app_name": "vocabularies", "model_type": null }, "category": "property" }, "choice_label": { "name": "choice_label", "category": "property", "value": "22G" }, "description": { "name": "description", "category": "property", "value": "Fluorescent Protein; Ex/Em max: / nm" }, "label": { "name": "label", "category": "property", "value": "22G (Fluorescent Protein; Ex/Em max: / nm)" }, "short_name": { "name": "short_name", "category": "property", "value": "22G" }, "image_url": { "name": "image_url", "category": "property", "value": "" }, "category": { "name": "category", "value": { "id": "34f083df-f985-455e-a2c3-7931746e54d0", "name": "imaging_channel_labels", "label": "Imaging_Channel_Labels", "deleted": false, "model_name": "category", "app_name": "vocabularies", "model_type": "DEFAULT" }, "category": "property" }, "dbxref_id": { "name": "dbxref_id", "category": "property", "value": "https://www.fpbase.org/table/" }, "default": { "name": "default", "category": "property", "value": false }, "permissions": { "name": "permissions", "value": { "public": true, "actions": {}, "allowed": [ "view" ] }, "category": "property" }, "public": { "name": "public", "value": true, "category": "property" }, "owner": { "name": "owner", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "owned_by": { "name": "owned_by", "value": { "id": 1, "name": "SYSTEM_GROUP" }, "category": "property" } }, { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/03103066-11b0-4c7e-8a9f-c6578e743372/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": "03103066-11b0-4c7e-8a9f-c6578e743372" }, "created_by": { "name": "created_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "modified_by": { "name": "modified_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "created": { "name": "created", "value": "2025-12-16T09:31:46.637897+01:00", "category": "property" }, "modified": { "name": "modified", "value": "2025-12-16T09:31:46.637977+01:00", "category": "property" }, "model_name": { "name": "model_name", "category": "property", "value": "term" }, "app_name": { "name": "app_name", "category": "property", "value": "vocabularies" }, "model_type": { "name": "model_type", "category": "property", "value": "DEFAULT" }, "name": { "name": "name", "value": { "id": "03103066-11b0-4c7e-8a9f-c6578e743372", "name": "TIFF", "model_name": "term", "app_name": "vocabularies", "model_type": null }, "category": "property" }, "choice_label": { "name": "choice_label", "category": "property", "value": "TIFF" }, "description": { "name": "description", "category": "property", "value": "" }, "label": { "name": "label", "category": "property", "value": "TIFF" }, "short_name": { "name": "short_name", "category": "property", "value": "TIFF" }, "image_url": { "name": "image_url", "category": "property", "value": "" }, "category": { "name": "category", "value": { "id": "48a3f42e-99b9-4f3a-a860-dc6534b66a6f", "name": "transmission_em_image_format", "label": "Image Format", "deleted": false, "model_name": "category", "app_name": "vocabularies", "model_type": "DEFAULT" }, "category": "property" }, "dbxref_id": { "name": "dbxref_id", "category": "property", "value": "TIFF" }, "default": { "name": "default", "category": "property", "value": false }, "permissions": { "name": "permissions", "value": { "public": true, "actions": {}, "allowed": [ "view" ] }, "category": "property" }, "public": { "name": "public", "value": true, "category": "property" }, "owner": { "name": "owner", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, "owned_by": { "name": "owned_by", "value": { "id": 1, "name": "SYSTEM_GROUP" }, "category": "property" } }, { "url": { "name": "url", "value": "https://labid-demo.embl.de/api/v2/vocabularies/terms/02ffbdc0-05e1-4b3e-838b-37f661818143/?format=api", "category": "property" }, "id": { "name": "id", "category": "property", "value": "02ffbdc0-05e1-4b3e-838b-37f661818143" }, "created_by": { "name": "created_by", "value": { "id": 1, "username": "admin", "full_name": "Admin User" }, "category": "property" }, 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